PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma3g01590.1
Common NameZOSMA_3G01590
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 94aa    MW: 10426.7 Da    PI: 7.5271
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma3g01590.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.2e-0620591554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +i + + +L++llP+  + +s+++  + +L++++++I+sL
  Zosma3g01590.1 20 QIVDLLTKLQDLLPETRSRSSGRVAASKVLQETCNHIRSL 59
                    6778999********6699*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.8E-7477IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.369559IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-71881IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009416Biological Processresponse to light stimulus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MSSRSQRSRQ STTTRITDEQ IVDLLTKLQD LLPETRSRSS GRVAASKVLQ ETCNHIRSLH  60
KEVDDLSERL SELLATTDTT SAQAAIIRSL LEM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389574.17e-39PREDICTED: transcription factor ILI6-like
SwissprotB8APB56e-38ILI6_ORYSI; Transcription factor ILI6
SwissprotQ0DUR26e-38ILI6_ORYSJ; Transcription factor ILI6
TrEMBLA0A0K9P3S01e-58A0A0K9P3S0_Z
STRINGGSMUA_Achr2P07410_0012e-38(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26753378
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.13e-34bHLH family protein